Search results for "2D-DIGE analysi"

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Adaptative biochemical pathways and regulatory networks in Klebsiella oxytoca BAS-10 producing a biotechnologically relevant exopolysaccharide during…

2012

Abstract Background A bacterial strain previously isolated from pyrite mine drainage and named BAS-10 was tentatively identified as Klebsiella oxytoca. Unlikely other enterobacteria, BAS-10 is able to grow on Fe(III)-citrate as sole carbon and energy source, yielding acetic acid and CO2 coupled with Fe(III) reduction to Fe(II) and showing unusual physiological characteristics. In fact, under this growth condition, BAS-10 produces an exopolysaccharide (EPS) having a high rhamnose content and metal-binding properties, whose biotechnological applications were proven as very relevant. Results Further phylogenetic analysis, based on 16S rDNA sequence, definitively confirmed that BAS-10 belongs t…

Proteomicsmetal binding exopolysaccharideRhamnoseeducationlcsh:QR1-502BioengineeringSettore BIO/19 - Microbiologia GeneraleFerric CompoundsApplied Microbiology and BiotechnologyCitric Acidlcsh:Microbiology03 medical and health scienceschemistry.chemical_compoundAcetic acidRNA Ribosomal 16SGene Regulatory NetworksPhylogeny030304 developmental biology2. Zero hunger0303 health sciencesbiology030306 microbiologyResearchKlebsiella oxytocaKlebsiella oxytocabiology.organism_classificationBacterial strainKlebsiella oxytoca; 2D-DIGE analysis; metal binding exopolysaccharide;Metabolic pathwaychemistryBiochemistryFermentation2D-DIGE analysiFermentationEnergy sourceCitric acidMetabolic Networks and PathwaysBiotechnology
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Differential proteomic analysis of an engineered Streptomyces coelicolor strain reveals metabolic pathways supporting growth on n-hexadecane

2012

The alkB gene, encoding an alkane monooxygenase in the actinomycete Gordonia sp. SoCg, was expressed in the non-alkane-degrading actinomycete Streptomyces coelicolor M145. The resulting engineered strain, M145-AH, can grow on n-hexadecane as sole carbon source. To unravel proteins associated with growth on n-alkanes, proteome of M145-AH after 6, 24, and 48 h of incubation in the Bushnell-Haas (BH) mineral medium containing n-hexadecane as sole carbon source (H condition) and in BH without any carbon source (0 condition) were compared using 2D-differential gel electrophoresis. Proteome analysis revealed significant changes only at 48 h, showing 48 differentially abundant proteins identified …

ProteomicsProteomeAlkBProtein metabolismGene ExpressionStreptomyces coelicolorSettore BIO/19 - Microbiologia GeneraleProteomicsApplied Microbiology and BiotechnologyStreptomyceschemistry.chemical_compoundAlkanesElectrophoresis Gel Two-DimensionalbiologyStreptomyces coelicolorProteomicGeneral MedicineMetabolism2d-dige analysisMembrane transportbiology.organism_classificationCarbonRecombinant ProteinsStreptomycesCulture MediaN-alkane monoxygenaseStreptomyceN-hexadecane utilizationchemistryBiochemistryEngineered strainProteomebiology.protein2D-DIGE analysiCytochrome P-450 CYP4AMetabolic Networks and PathwaysBiotechnologyApplied Microbiology and Biotechnology
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